PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 259aa    MW: 29540.5 Da    PI: 7.9277
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907895.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM812.6e-25101393128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      G  F+  deel+ +yL +kv+g++ +   +i+e+d+y +ePw+L  +++++++    + F++ +++ a++ r +r + +g+W+a g+ + v + 
  XP_010907895.1  10 TGWTFDLDDEELIEHYLVPKVRGEQKSHLCFIPELDVYATEPWNLGLEFRHGKHrdAFFCFTRVARSVASNGRLQRGAGNGTWHAGGRRTLVRC- 103
                     5899999******************888788**************8544443332256889999999999******99**********999999. PP

             NAM  96 kgelvglk.ktLvfy..kgrapkgektdWvmheyrl 128
                     +ge+ g k   L f    ++  k++ t+W+mheyrl
  XP_010907895.1 104 NGEVSGQKmSNLKFMlrAKKGGKAVATSWIMHEYRL 139
                     77777777356999854456667779********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.7798159IPR003441NAC domain
SuperFamilySSF1019414.45E-289158IPR003441NAC domain
PfamPF023654.8E-1310139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MVVPVVADLT GWTFDLDDEE LIEHYLVPKV RGEQKSHLCF IPELDVYATE PWNLGLEFRH  60
GKHRDAFFCF TRVARSVASN GRLQRGAGNG TWHAGGRRTL VRCNGEVSGQ KMSNLKFMLR  120
AKKGGKAVAT SWIMHEYRLF KPAIDDQGKE MVLYRIQKSR TGLSDDHECL DDDFSVSMAN  180
QQRWKRKRAQ MPPPGIADYE QRLGSTNMSL WEDSGNTKVN QLMYDDHAQQ PEGIMIESTT  240
SKSDQMPLIM SDNRRVPTC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-161113918140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907895.10.0PREDICTED: NAC domain-containing protein 55-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G29035.14e-18NAC domain containing protein 3